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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1330951_1333096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1330951 - 1333096

Intron Length:

2146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTTCTTAACA

Flanking Amino Acid:

RMQKLTKLREEHILLRNQNL

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

87.9

0.85

0.8

85.2

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

91.6

1.3

0.7

95.02

20.5

Associated Gene:

Gene:

MRVI1

Ensembl Gene ID:

ENSAPLG00000004936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005114

1323244 - 1350062

26819