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Intron Name: Anas_platyrhynchos_platyrhynchos_5_133746_135168_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
133746 - 135168

Intron Length:
1423

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGTGTTCA

5'SS Class:
major

3'SS Sequence:
TTCCCCTCTTAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAC

U12 Branch Point Sequence:
TTTTTCTCCACC

Flanking Amino Acid:
VTSPTRQYHSDREKDHSSSR

Intron Amino Acid Position:
99

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.61
0.9
68.1
32.4

Major BPS
54.8
0.12
1.3
66.4
39.9

Major PPT
71.8
0.49
1
75.5
27

Minor 5ss
41.3
-1
2.6
46.9
43.8

Minor BPS
60.9
0.32
2
78.1
37.8

Associated Gene:

Gene:
BTBD10

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121054 - 156470
35417