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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1341776_1342534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1341776 - 1342534

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CTCTCCTTTATT

Flanking Amino Acid:

RAEMVGAVRQEKRMSKATEV

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

78.5

0.64

0.7

77.5

30.9

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

67.8

0.64

1.6

79.57

42.9

Associated Gene:

Gene:

MRVI1

Ensembl Gene ID:

ENSAPLG00000004936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005114

1323244 - 1350062

26819