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Intron Name: Anas_platyrhynchos_platyrhynchos_5_135455_137501_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
135455 - 137501

Intron Length:
2047

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGTATC

5'SS Class:
major

3'SS Sequence:
TATTTTTGATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAT

U12 Branch Point Sequence:
TTATTTTTGATC

Flanking Amino Acid:
FTAQPNTMLGRMFGSGREHN

Intron Amino Acid Position:
194

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1.1
79.1
34.5

Major BPS
83.6
0.84
0.8
71.9
35.8

Major PPT
77.3
0.62
1
78.3
39.6

Minor 5ss
42.7
-0.8
2.5
54.7
42.5

Minor BPS
68
0.55
1.1
73.12
31.8

Associated Gene:

Gene:
BTBD10

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121054 - 156470
35417