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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1375656_1376700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1375656 - 1376700

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TAATACATAACT

Flanking Amino Acid:

KVVVRIICTKVNKASGIVEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

75.3

35.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.3

0.57

79.4

32.8

Minor 5ss

43.3

-0.7

3.1

56.7

41.8

Minor BPS

62.4

0.47

1.8

80.9

39.6

Associated Gene:

Gene:

RNF141

Ensembl Gene ID:

ENSAPLG00000004710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004843

1373631 - 1382641

9011