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Intron Name: Anas_platyrhynchos_platyrhynchos_5_13878690_13916223_F

Intron Information:

Intron Rank:

147071

Intron Class:

major

Intron Phase:

Intron Coordinates:

13878690 - 13916223

Intron Length:

37534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

CTTGCTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

74.2

0.6

69.3

38.4

Major PPT

79.7

0.67

0.9

72.9

35.8

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

62.8

0.48

1.7

79.06

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042791

13764685 - 13916361

151677