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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1402407_1409766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1402407 - 1409766

Intron Length:

7360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGACCTTATTT

Flanking Amino Acid:

PHRDFYNVRKVDTHIHAAAC

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.9

0.72

0.9

78.6

39.1

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

61.6

0.44

1.6

75.08

41.9

Associated Gene:

Gene:

AMPD3

Ensembl Gene ID:

ENSAPLG00000004559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004696

1394390 - 1418262

23873