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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1409897_1412416_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1409897 - 1412416

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

HVLALIADGPTKTYCHRRLN

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

80.5

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

62.6

0.43

2.2

74.5

34.6

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

AMPD3

Ensembl Gene ID:

ENSAPLG00000004559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004696

1394390 - 1418262

23873