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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1412670_1414769_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1412670 - 1414769

Intron Length:

2100

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTA|GCATGCAAC

5'SS Class:

weak_major

3'SS Sequence:

CCTTTTGTATAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TTTCTACTATTT

Flanking Amino Acid:

FPRTTSQYLCTTSKHNVNLF

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.3

57.2

44.6

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

65.9

0.36

1.1

71.7

37.2

Minor 5ss

37.3

-1.4

3.9

52.6

39.9

Minor BPS

45.6

-0.2

2.1

71.07

39.9

Associated Gene:

Gene:

AMPD3

Ensembl Gene ID:

ENSAPLG00000004559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004696

1394390 - 1418262

23873