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Intron Name: Anas_platyrhynchos_platyrhynchos_5_143770_144259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143770 - 144259

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

CCCTTGTTCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAA

Flanking Amino Acid:

PVDFSDLPWPLWSIYFDK*

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.9

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.36

69.8

34.3

Minor 5ss

-1.5

3.4

55.1

43.5

Minor BPS

66.6

0.52

1.3

71.49

33.9

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201