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Intron Name: Anas_platyrhynchos_platyrhynchos_5_144417_144915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144417 - 144915

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTATATTTACA

Flanking Amino Acid:

YPYSDNSSILGENSHIGIDM

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

86.8

0.83

0.8

80.8

35.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

54.1

0.12

1.9

73.11

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201