Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_14444483_14445284_R

Intron Information:

Intron Rank:

132709

Intron Class:

major

Intron Phase:

Intron Coordinates:

14444483 - 14445284

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCTGAA

5'SS Class:

major

3'SS Sequence:

ATATTCATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTGACTTCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

64.6

37.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

77.6

0.62

0.9

71.2

38.7

Minor 5ss

30.7

-2.2

3.4

39.4

46.5

Minor BPS

52.4

0.15

1.9

72.66

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031014

14266867 - 14445410

178544