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Intron Name: Anas_platyrhynchos_platyrhynchos_5_14612570_14614311_R

Intron Information:

Intron Rank:

154331

Intron Class:

major

Intron Phase:

Intron Coordinates:

14612570 - 14614311

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGAAAC

5'SS Class:

major

3'SS Sequence:

GTGTGCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GCTTATATAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.3

67.8

37.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

61.6

0.26

1.1

54.6

45.8

Minor 5ss

29.3

-2.4

2.7

32.7

35.5

Minor BPS

45.7

-0.4

1.9

51.4

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036927

14609945 - 14614580

4636