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Intron Name: Anas_platyrhynchos_platyrhynchos_5_147669_149492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147669 - 149492

Intron Length:

1824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTACTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTATCTCACTT

Flanking Amino Acid:

SMDSMLQAGEGGPKRTHPTV

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

75.1

33.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.65

0.9

76.4

37.4

Minor 5ss

-1.8

3.1

45.2

42.8

Minor BPS

53.2

0.18

1.8

76.38

40.7

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201