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Intron Name: Anas_platyrhynchos_platyrhynchos_5_149582_150200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

149582 - 150200

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTGAAATCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTCTTGAAAT

Flanking Amino Acid:

EYIVSTNTVVSTSVLDSGDA

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

66.1

0.36

58.3

41.8

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

0.52

1.5

78.25

37.2

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201