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Intron Name: Anas_platyrhynchos_platyrhynchos_5_14965242_15004725_F

Intron Information:

Intron Rank:

128527

Intron Class:

major

Intron Phase:

Intron Coordinates:

14965242 - 15004725

Intron Length:

39484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCCTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

70.1

0.45

0.9

71.1

33.5

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

67.4

0.63

1.6

86.17

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033351

14964913 - 15013275

48363