Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_15026842_15033900_R

Intron Information:

Intron Rank:

135466

Intron Class:

major

Intron Phase:

Intron Coordinates:

15026842 - 15033900

Intron Length:

7059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

GGATTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GGATTTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.8

0.47

65.8

44.1

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

68.7

0.58

1.2

69.4

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048304

15024837 - 15034623

9787