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Intron Name: Anas_platyrhynchos_platyrhynchos_5_150778_152868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

150778 - 152868

Intron Length:

2091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCGTTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCTAC

U12 Branch Point Sequence:

CCTCCCCTACCT

Flanking Amino Acid:

IDGKFVFVDQRATAILAYLP

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

43.7

-0.4

1.2

35.7

31.8

Major PPT

62.7

0.29

1.1

60.1

40.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

49.5

0.04

69.93

46.6

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201