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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15116765_15117702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15116765 - 15117702

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAATGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

GCTTCCTTCACG

Flanking Amino Acid:

MKSRYQNMAQSAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

62.2

39.2

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

92.8

0.96

0.6

92.6

17.4

Minor 5ss

35.6

-1.6

3.3

47.9

47.5

Minor BPS

65.4

0.34

1.9

67.9

45.5

Associated Gene:

Gene:

RAG2

Ensembl Gene ID:

ENSAPLG00000011769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012239

15116754 - 15119320

2567