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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15143753_15148508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15143753 - 15148508

Intron Length:

4756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TTTTCTGGCATT

Flanking Amino Acid:

FCKGCIVKSIRDAGHKCPVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

69.7

0.44

0.9

62.8

38.3

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

46.2

-0.2

2.4

76.06

41.4

Associated Gene:

Gene:

TRAF6

Ensembl Gene ID:

ENSAPLG00000013488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045982

15141954 - 15153227

11274

ENSAPLT00000018333

15136624 - 15153403

16780

ENSAPLT00000014047

15140298 - 15153227

12930