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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15151528_15152345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15151528 - 15152345

Intron Length:

818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAAATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATG

Flanking Amino Acid:

FYSAFGCPEKMQRNELARHM

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.8

0.51

0.9

63.8

41.5

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

67.7

0.42

1.2

65.81

36.4

Associated Gene:

Gene:

TRAF6

Ensembl Gene ID:

ENSAPLG00000013488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014047

15140298 - 15153227

12930

ENSAPLT00000045982

15141954 - 15153227

11274

ENSAPLT00000018333

15136624 - 15153403

16780