Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_15173981_15177332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15173981 - 15177332

Intron Length:

3352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTCC

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CTTTACTAACTC

Flanking Amino Acid:

TLQAIFYPVQGQELTIRQIA

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

68.6

37.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

82.9

0.74

0.9

80.3

37.3

Minor 5ss

45.2

-0.5

2.8

60.5

Minor BPS

47.4

-0.2

2.1

62.54

43.6

Associated Gene:

Gene:

PRR5L

Ensembl Gene ID:

ENSAPLG00000013479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037728

15166968 - 15208043

41076

ENSAPLT00000030671

15166968 - 15208043

41076

ENSAPLT00000014034

15167968 - 15208468

40501