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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15221546_15224019_R

Intron Information:

Intron Rank:

135299

Intron Class:

major

Intron Phase:

Intron Coordinates:

15221546 - 15224019

Intron Length:

2474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CAGCTTTTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.3

0.82

0.7

24.1

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

47.3

-0.3

1.3

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039082

15215605 - 15224080

8476