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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15233078_15233175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15233078 - 15233175

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGCGGCTGAGCG

Flanking Amino Acid:

EFAALRGLLKAPSKEAVRQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

66.9

0.38

62.2

34.7

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

38.5

-1

37.56

44.5

Associated Gene:

Gene:

COMMD9

Ensembl Gene ID:

ENSAPLG00000021527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041598

15233027 - 15238599

5573