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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15233770_15236875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15233770 - 15236875

Intron Length:

3106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTAATCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATC

Flanking Amino Acid:

AWRNEAQASQISLPRLVDMD

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.9

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.2

0.61

0.9

74.2

36.1

Minor 5ss

37.4

-1.4

2.7

42.4

38.3

Minor BPS

75.8

0.79

1.1

78.23

31.1

Associated Gene:

Gene:

COMMD9

Ensembl Gene ID:

ENSAPLG00000021527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041598

15233027 - 15238599

5573