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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15313379_15316967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15313379 - 15316967

Intron Length:

3589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTCTTTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATGAAAG

Flanking Amino Acid:

CPDGSDEENCTANPLLCSTA

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

87.2

0.84

0.7

83.5

24.7

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

45.8

-0.4

56.24

44.2

Associated Gene:

Gene:

LDLRAD3

Ensembl Gene ID:

ENSAPLG00000013350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013902

15266017 - 15346204

80188