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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15465480_15466384_R

Intron Information:

Intron Rank:

139131

Intron Class:

major

Intron Phase:

Intron Coordinates:

15465480 - 15466384

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAC

U12 Branch Point Sequence:

CGTTACCTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

64.2

0.35

60.7

37.6

Major PPT

81.4

0.71

0.7

72.9

31.9

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

-0

2.1

70.68

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036335

15463608 - 15466956

3349