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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15530392_15532006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15530392 - 15532006

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTTAC

5'SS Class:

major

3'SS Sequence:

ATATTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

GCAACATTATAT

Flanking Amino Acid:

WSGKQPICIKACREPKISDL

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

71.2

35.4

Major BPS

70.4

0.51

67.1

39.4

Major PPT

81.1

0.7

0.8

74.2

40.7

Minor 5ss

39.2

-1.2

3.1

52.1

45.1

Minor BPS

44.3

-0.3

1.9

57.35

44.2

Associated Gene:

Gene:

PAMR1

Ensembl Gene ID:

ENSAPLG00000012925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030066

15482220 - 15536937

54718

ENSAPLT00000013464

15482220 - 15537660

55441