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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15598658_15602172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15598658 - 15602172

Intron Length:

3515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCCT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTTTTTATT

Flanking Amino Acid:

ENLVQACFQQIQTVTKKVLV

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

77.8

36.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.9

81.4

Minor 5ss

36.2

-1.6

3.1

51.2

45.2

Minor BPS

61.5

0.44

1.6

80.48

35.3

Associated Gene:

Gene:

SLC1A2

Ensembl Gene ID:

ENSAPLG00000012571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026166

15540776 - 15624210

83435

ENSAPLT00000022289

15540776 - 15624210

83435

ENSAPLT00000013133

15540776 - 15624210

83435