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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15645494_15659527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15645494 - 15659527

Intron Length:

14034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTGGAGTAACA

Flanking Amino Acid:

EEQYPSSAGRGSTTIIDGDH

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

59.1

41.5

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

86.5

0.82

0.7

85.6

29.2

Minor 5ss

-2.4

3.3

29.5

43.4

Minor BPS

-0.3

2.6

68.02

44.4

Associated Gene:

Gene:

CD44

Ensembl Gene ID:

ENSAPLG00000012207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034927

15641197 - 15698218

57022

ENSAPLT00000032120

15641197 - 15698181

56985

ENSAPLT00000028346

15641197 - 15698218

57022