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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15657059_15667975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15657059 - 15667975

Intron Length:

10917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

ATCATCTTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCATTATTGATT

Flanking Amino Acid:

EDDERHRGSTTPVTSENEKH

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

77.1

32.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

72.5

0.51

70.7

39.1

Minor 5ss

45.7

-0.4

3.1

67.1

38.9

Minor BPS

56.9

0.3

1.6

72.05

39.2

Associated Gene:

Gene:

CD44

Ensembl Gene ID:

ENSAPLG00000012207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029682

15654079 - 15698218

44140