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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15661240_15662808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15661240 - 15662808

Intron Length:

1569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGGAAC

5'SS Class:

major

3'SS Sequence:

AACATCACCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTAACATCACC

Flanking Amino Acid:

VAKKEYAPSTTDVTSSGNGS

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

68.5

36.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.23

51.3

Minor 5ss

34.4

-1.8

3.2

44.6

38.4

Minor BPS

47.9

-0.1

2.2

69.45

41.3

Associated Gene:

Gene:

CD44

Ensembl Gene ID:

ENSAPLG00000012207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023848

15654079 - 15708607

54529

ENSAPLT00000020935

15654079 - 15708607

54529