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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15662929_15667975_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15662929 - 15667975

Intron Length:

5047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

ATCACCACAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTAACATCACC

Flanking Amino Acid:

EDDERHRGSTNVTSSGNGSD

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

77.1

32.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

59.7

0.22

53.1

35.8

Minor 5ss

45.7

-0.4

3.1

67.1

38.9

Minor BPS

47.9

-0.1

2.2

69.45

41.3

Associated Gene:

Gene:

CD44

Ensembl Gene ID:

ENSAPLG00000012207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028346

15641197 - 15698218

57022