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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15663722_15667975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15663722 - 15667975

Intron Length:

4254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

CATGTCCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GTTCAATGAACC

Flanking Amino Acid:

EDDERHRGSTTPGPPRVHLE

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

77.1

32.1

Major BPS

61.3

0.28

30.6

Major PPT

68.7

0.42

62.4

38.3

Minor 5ss

45.7

-0.4

3.1

67.1

38.9

Minor BPS

48.5

-0.1

1.9

64.77

39.4

Associated Gene:

Gene:

CD44

Ensembl Gene ID:

ENSAPLG00000012207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032120

15641197 - 15698181

56985

ENSAPLT00000023848

15654079 - 15708607

54529

ENSAPLT00000046443

15654079 - 15697274

43196

ENSAPLT00000020935

15654079 - 15708607

54529

ENSAPLT00000034927

15641197 - 15698218

57022

ENSAPLT00000012731

15641197 - 15697274

56078

ENSAPLT00000034540

15641197 - 15698218

57022