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Intron Name: Anas_platyrhynchos_platyrhynchos_5_157320_158205_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

157320 - 158205

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCAATCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

SVFKILNYSQNDLIGQSLFD

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

73.3

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.52

0.9

65.7

35.8

Minor 5ss

70.8

0.7

2.2

82.3

37.4

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201