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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15778312_15780581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15778312 - 15780581

Intron Length:

2270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

CACATCTTAAGG

Flanking Amino Acid:

ILKLRTELAKDDIKVSVNDF

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

76.8

0.67

40.9

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

48.5

-0.2

1.8

48.25

45.3

Associated Gene:

Gene:

PDHX

Ensembl Gene ID:

ENSAPLG00000011686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012236

15770136 - 15807049

36914