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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15786573_15788516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15786573 - 15788516

Intron Length:

1944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTTTC

5'SS Class:

major

3'SS Sequence:

CTCATTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTGTTTTAAAT

Flanking Amino Acid:

PKLEHLPGKLQVRLSPAARN

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

72.4

33.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.1

0.54

0.8

72.9

31.8

Minor 5ss

41.5

-0.9

58.2

40.5

Minor BPS

58.2

0.34

1.5

70.46

Associated Gene:

Gene:

PDHX

Ensembl Gene ID:

ENSAPLG00000011686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012236

15770136 - 15807049

36914