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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15807186_15811040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15807186 - 15811040

Intron Length:

3855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

AATTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

ANGCGCNGAQEKLHPRNLIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.7

0.9

74.5

39.4

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

APIP

Ensembl Gene ID:

ENSAPLG00000011642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031454

15807147 - 15822340

15194

ENSAPLT00000012123

15807147 - 15822340

15194