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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15816383_15819250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15816383 - 15819250

Intron Length:

2868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATATCTT

5'SS Class:

major

3'SS Sequence:

ATTTTTCTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CATTTTTAAAAT

Flanking Amino Acid:

IQKCTSGGYYRYDDTLVVPI

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

68.1

42.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.6

0.73

0.7

29.2

Minor 5ss

46.1

-0.4

67.6

43.5

Minor BPS

52.2

0.15

1.8

69.32

Associated Gene:

Gene:

APIP

Ensembl Gene ID:

ENSAPLG00000011642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031454

15807147 - 15822340

15194

ENSAPLT00000012123

15807147 - 15822340

15194