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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15820086_15821274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

15820086 - 15821274

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATACCTTAATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

82.4

29.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

0.8

73.6

30.4

Minor 5ss

40.1

-1.1

3.1

57.1

47.2

Minor BPS

77.7

0.95

1.2

84.84

35.1

Associated Gene:

Gene:

APIP

Ensembl Gene ID:

ENSAPLG00000011642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012123

15807147 - 15822340

15194