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Intron Name: Anas_platyrhynchos_platyrhynchos_5_15844288_15846035_F

Intron Information:

Intron Rank:

137753

Intron Class:

major

Intron Phase:

Intron Coordinates:

15844288 - 15846035

Intron Length:

1748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGAAA

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

48.4

-0.1

1.4

56.3

37.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045733

15843422 - 15846234

2813