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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1607225_1609089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1607225 - 1609089

Intron Length:

1865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTACATCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATGTTTTGACA

Flanking Amino Acid:

RTALSHAKMLDKEVRAIFLR

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

75.3

0.57

0.9

69.5

36.1

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

58.4

0.26

1.3

64.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027765

1515891 - 1610801

94911