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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16153890_16155068_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
16153890 - 16155068

Intron Length:
1179

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTTAT

5'SS Class:
strong_major

3'SS Sequence:
AATTGTTTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAA

U12 Branch Point Sequence:
TTTCTGTCAATT

Flanking Amino Acid:
ETPLQLASAAGNYELVSLLL

Intron Amino Acid Position:
610

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98
1.13
0.6
93.1
14.6

Major BPS
67
0.42
1.1
57.3
41.7

Major PPT
70.8
0.47
0.9
62.5
43.4

Minor 5ss
41.9
-0.9
2.9
57.8
46.8

Minor BPS
50
0.08
2.2
77.15
39.7

Associated Gene:

Gene:
ABTB2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16022343 - 16164211
141869