Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_16159015_16159692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16159015 - 16159692

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CAACTATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCTGTTACAACT

Flanking Amino Acid:

HKVLLVTASNRFKTLMTNKT

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

77.5

32.9

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

69.4

0.44

0.9

65.8

39.4

Minor 5ss

29.1

-2.4

2.8

34.7

41.7

Minor BPS

47.4

-0.1

1.9

68.07

43.3

Associated Gene:

Gene:

ABTB2

Ensembl Gene ID:

ENSAPLG00000008248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008605

16022343 - 16164211

141869