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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16192859_16193537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16192859 - 16193537

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TCCAGATTGACT

Flanking Amino Acid:

SLKQLYTMTMDVHSRYRTEA

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.9

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

82.8

0.74

0.9

80.3

37.3

Minor 5ss

49.1

-0.1

2.4

64.8

41.7

Minor BPS

46.7

-0.1

2.1

64.83

45.7

Associated Gene:

Gene:

NAT10

Ensembl Gene ID:

ENSAPLG00000007638

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008019

16172483 - 16195281

22799