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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16202199_16203271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16202199 - 16203271

Intron Length:

1073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATATTT

Flanking Amino Acid:

GQSGPRGAPRGRGGPPRPNR

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.8

74.2

40.7

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

55.7

0.26

1.8

79.9

36.7

Associated Gene:

Gene:

CAPRIN1

Ensembl Gene ID:

ENSAPLG00000006975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019087

16202134 - 16234272

32139

ENSAPLT00000007313

16202134 - 16234272

32139

ENSAPLT00000034318

16202134 - 16234272

32139