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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16212198_16216469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16212198 - 16216469

Intron Length:

4272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTTTCTTACTA

Flanking Amino Acid:

VDEWTVETVEVVNSLQQQTQ

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

76.5

0.6

0.9

71.1

39.6

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

66.9

0.53

1.6

75.34

36.5

Associated Gene:

Gene:

CAPRIN1

Ensembl Gene ID:

ENSAPLG00000006975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007313

16202134 - 16234272

32139

ENSAPLT00000034318

16202134 - 16234272

32139