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Intron Name: Anas_platyrhynchos_platyrhynchos_5_162163_163117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162163 - 163117

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTACTC

5'SS Class:

major

3'SS Sequence:

CTCACTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTCCTCACCA

Flanking Amino Acid:

TDQQGRIKNAREAHSQIEKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

62.7

42.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.2

0.46

0.9

68.8

Minor 5ss

35.2

-1.7

3.5

50.8

45.7

Minor BPS

69.1

0.6

1.8

83.78

36.8

Associated Gene:

Gene:

ARNTL

Ensembl Gene ID:

ENSAPLG00000003885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004089

143668 - 169868

26201