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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16233845_16234162_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16233845 - 16234162

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GCCTCCCGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTAAC

U12 Branch Point Sequence:

GCCTCCCGCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

49.8

-0

1.2

52.9

39.1

Major PPT

63.3

0.3

0.9

56.4

33.6

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

43.6

-0.5

2.2

53.54

44.5

Associated Gene:

Gene:

CAPRIN1

Ensembl Gene ID:

ENSAPLG00000006975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034318

16202134 - 16234272

32139

ENSAPLT00000019087

16202134 - 16234272

32139

ENSAPLT00000007313

16202134 - 16234272

32139