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Intron Name: Anas_platyrhynchos_platyrhynchos_5_16289280_16291400_F

Intron Information:

Intron Rank:

148596

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16289280 - 16291400

Intron Length:

2121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATCT

5'SS Class:

weak_major

3'SS Sequence:

CTCTGTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

GGATTCAGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

67.8

38.2

Major BPS

64.9

0.37

37.5

Major PPT

69.5

0.44

67.2

38.3

Minor 5ss

57.8

0.26

2.4

75.1

40.8

Minor BPS

43.2

-0.5

1.9

50.68

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028403

16288888 - 16293590

4703